2 verses have
“Why”
in Edition Clear Qur'an by Talal Itani / An-Naml (The Ant)
27:20Then he inspected the birds, and said, “Why do I not see the hoopoe? Or is he among the absentees?
27:46He said, “O my people, why are you quick to do evil rather than good? If only you would seek God’s forgiveness, so that you may be shown mercy.”
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The Holy Quran · Al-Baqara (The Cow) · 2:274